https://conf.tube/videos/watch/a865e290-f57f-4265-a70e-7f87ea2f029b Presenter: Manabu Ishii, Genome Analytics Japan Inc. Summary: Discusses practical tips for using Toil, a workflow engine, in various High-Performance Computing (HPC) environments. This talk will cover the seamless integration of Toil with existing Common Workflow Language (CWL) definitions without needing modifications. Key points include the creation of a singularity cache to avoid delays in image creation from the internet if connectivity issues arise. This talk emphasizes the importance of logging for troubleshooting and outlines use of grid engines and SLURM batch systems, which work efficiently without modifications. This talk will cover several command line tips to extend Toil's functionality, including memory management techniques essential for resource-intensive applications such as Java-based tools. The talk aims to provide the audience with practical insights into optimizing Toil workflows in HPC environments to ensure smooth and efficient operations. Questions, comments? See https://cwl.discourse.group/t/various-tips-for-over-thousand-of-jobs-at-hpc-environment/879 Sat, 09 May 2026 03:47:14 GMT https://validator.w3.org/feed/docs/rss2.html PeerTube - https://conf.tube https://conf.tube/client/assets/images/icons/icon-1500x1500.png https://conf.tube/videos/watch/a865e290-f57f-4265-a70e-7f87ea2f029b All rights reserved, unless otherwise specified in the terms specified at https://conf.tube/about and potential licenses granted by each content's rightholder.